Kyle Medley - Stowers Institute for Medical Research

基本信息

Career Trajectory

Bio

J. Kyle Medley received the BSc degree in mechanical engineering from the University of Missouri-Kansas City, Kansas City, MO, USA in 2014 and is currently workingt toward the Ph.D. degree in bioengineering from the University of Washington, Seattle, WA, USA. His research interests include modeling dynamical biophysical processes such as metabolism and gene expression regulation. He currently develops libRoadRunner, a software package for simulating dynamical models encoded in SBML.

Research Interests

Papers共 24 篇Author StatisticsCo-AuthorSimilar Experts

By YearBy Citation主题筛选期刊级别筛选合作者筛选合作机构筛选

Metabolic Reprogramming Underlies Cavefish Muscular Endurance Despite Loss of Muscle Mass and Contractility

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICAno. 5 (2023): 1-12

Cited16Views0WOSBibtex

Metabolic Reprogramming Underlies Cavefish Muscular Endurance Despite Loss of Muscle Mass and Contractility

Luke Olsen,Michaella Levy,J Kyle Medley,Huzaifa Hassan,Richard Alexander,Emma Wilcock,Kexi Yi,Laurence Florens,Sean McKinney,Robert Peuß,Jenna Persons,Alexander Kenzior,Ernesto Maldonado,Andrew Gluesenkamp,Edward Mager,David Coughlin,Nicolas Rohner

bioRxiv (2022)

Cited20Views0Bibtex

Enhanced Lipogenesis Through Pparγ Helps Cavefish Adapt to Food Scarcity

Shaolei Xiong,Wei Wang,Alexander Kenzior,Luke Olsen,Jaya Krishnan,Jenna Persons,Kyle Medley,Robert Peuss,Yongfu Wang,Shiyuan Chen,Ning Zhang,Nancy Thomas,John M. Miles,Alejandro Sanchez Alvarado,Nicolas Rohner

Current Biology（2022）

Cited28Views0WOSBibtex

The Metabolome of Mexican Cavefish Shows a Convergent Signature Highlighting Sugar, Antioxidant, and Ageing-Related Metabolites

J. Kyle Medley,Jenna Persons,Tathagata Biswas,Luke Olsen,Robert Peuss,Jaya Krishnan,Shaolei Xiong,Nicolas Rohner

eLife（2022）

Cited14Views0WOSBibtex

BioSimulators: a Central Registry of Simulation Engines and Services for Recommending Specific Tools

Bilal Shaikh,Lucian P. Smith,Dan Vasilescu,Gnaneswara Marupilla,Michael Wilson,Eran Agmon,Henry Agnew,Steven S. Andrews,Azraf Anwar,Moritz E. Beber,Frank T. Bergmann,David Brooks,Lutz Brusch,Laurence Calzone,Kiri Choi,Joshua Cooper,John Detloff,Brian Drawert,Michel Dumontier,G. Bard Ermentrout,James R. Faeder,Andrew P. Freiburger,Fabian Frohlich,Akira Funahashi,Alan Garny,John H. Gennari,Padraig Gleeson,Anne Goelzer,Zachary Haiman,Jan Hasenauer,Joseph L. Hellerstein,Henning Hermjakob,Stefan Hoops,Jon C. Ison,Diego Jahn,Henry Jakubowski, Ryann Jordan,Matus Kalas,Matthias Koenig,Wolfram Liebermeister,Rahuman S. Malik Sheriff, Synchon Mandal,Robert McDougal,J. Kyle Medley,Pedro Mendes,Robert Mueller,Chris J. Myers,Aurelien Naldi,Tung V. N. Nguyen,David P. Nickerson,Brett G. Olivier,Drashti Patoliya,Loic Pauleve,Linda R. Petzold, Ankita Priya,Anand K. Rampadarath,Johann M. Rohwer,Ali S. Saglam,Dilawar Singh,Ankur Sinha,Jacky Snoep,Hugh Sorby,Ryan Spangler,Joern Starruss,Payton J. Thomas,David van Niekerk,Daniel Weindl,Fengkai Zhang,Anna Zhukova,Arthur P. Goldberg,James C. Schaff,Michael L. Blinov,Herbert M. Sauro,Ion I. Moraru,Jonathan R. Karr

Nucleic Acids Research（2022）

Cited16Views0EIWOSBibtex

A Compiler for Biological Networks on Silicon Chips

J. Kyle Medley,Jonathan Teo,Sung Sik Woo,Joseph Hellerstein,Rahul Sarpeshkar,Herbert M. Sauro

PLoS Computational Biology（2020）

Cited7Views0WOSEIBibtex

Resilience in a Natural Model of Metabolic Dysfunction Through Changes in Longevity and Ageing-Related Metabolites

J Kyle Medley,Jenna Persons,Tathagata Biswas,Luke Olsen,Robert Peuß,Jaya Krishnan,Shaolei Xiong,Nicolas Rohner

openalex（2020）

Cited3Views0Bibtex

Libsbmljs-Enabling Web-Based SBML Tools

J. Kyle Medley,Joseph Hellerstein,Herbert M. Sauro

Biosystems（2020）

Cited3Views0WOSEIBibtex

Accelerated Biochemical Kinetic Model Fitting Via the Asynchronous, Generalized Island Method

J Kyle Medley, Shaik Asifullah,Joseph Hellerstein,Herbert M Sauro

biorxiv（2019）

Cited0Views0Bibtex

Tellurium Notebooks—an Environment for Reproducible Dynamical Modeling in Systems Biology

J. Kyle Medley,Kiri Choi,Matthias Koenig,Lucian Smith,Stanley Gu,Joseph Hellerstein,Stuart C. Sealfon,Herbert M. Sauro

PLoS Computational Biology（2018）

Cited39Views0EIWOSBibtex

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