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It was long believed the sequence of genes in a genome was all that was needed to understand that organism’s biology. Recently, scientists have realized there’s another level of control: the epigenome. The epigenome is made up of chemicals that dot the DNA, dictating when, where and at what levels genes are expressed. But how these epigenomic tags affect biology, health and disease is still poorly understood. To decrypt the information they contain, researchers still need to answer basic questions about this extra genetic code.
Ecker first became entranced by the epigenome while he was studying Arabidopsis thaliana, a small flowering plant used for basic plant biology research. He and his colleagues wanted to know how many Arabidopsis genes were controlled by DNA methylation—one form of chemical markers that stud genes to affect how genes are expressed. In the process of the research, Ecker realized there was no good way to get a snapshot of all the methylation marks in a cell, so he created a method called MethylC-Seq to map epigenetic tags in any organism. Ecker has now applied MethylC-Seq to questions about epigenetics that span many fields, in particular, the human brain. He was the first to show that the epigenome is highly dynamic in brain cells during the transition from birth to adulthood. Now, he is charting the epigenetic differences between brain cell types to better understand disorders such as schizophrenia and Alzheimer’s disease.
Ecker first became entranced by the epigenome while he was studying Arabidopsis thaliana, a small flowering plant used for basic plant biology research. He and his colleagues wanted to know how many Arabidopsis genes were controlled by DNA methylation—one form of chemical markers that stud genes to affect how genes are expressed. In the process of the research, Ecker realized there was no good way to get a snapshot of all the methylation marks in a cell, so he created a method called MethylC-Seq to map epigenetic tags in any organism. Ecker has now applied MethylC-Seq to questions about epigenetics that span many fields, in particular, the human brain. He was the first to show that the epigenome is highly dynamic in brain cells during the transition from birth to adulthood. Now, he is charting the epigenetic differences between brain cell types to better understand disorders such as schizophrenia and Alzheimer’s disease.
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Papers共 494 篇Author StatisticsCo-AuthorSimilar Experts
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biorxiv(2025)
Charlotte N. Miller, Sean Jarrell-Hurtado, Manisha V. Haag, Y. Sara Ye, Mathew Simenc, Paloma Alvarez-Maldonado, Sara Behnami,Ling Zhang,Joseph Swift, Ashot Papikian, Jingting Yu,Kelly Colt,Joseph R. Ecker,Todd P. Michael, Julie A. Law,Wolfgang Busch
Developmental Cell (2025)
Nelson J Johansen, Niklas Kempynck,Nathan R Zemke,Saroja Somasundaram,Seppe De Winter,Marcus Hooper,Deepanjali Dwivedi,Ruchi Lohia, Fabien Wehbe,Bocheng Li, Darina Abaffyová,Ethan J Armand, Julie De Man, Eren Can Ekşi,Nikolai Hecker,Gert Hulselmans, Vasilis Konstantakos,David Mauduit,John K Mich,Gabriele Partel,Tanya L Daigle,Boaz P Levi,Kai Zhang,Yoshiaki Tanaka,Jesse Gillis,Jonathan T Ting,Yoav Ben-Simon,Jeremy Miller,Joseph R Ecker,Bing Ren,Stein Aerts,Ed S Lein,Bosiljka Tasic,Trygve E Bakken
Cell genomicsno. 6 (2025): 100879-100879
Ying Yuan,Pooja Biswas,Nathan R Zemke,Kelsey Dang, Yue Wu,Matteo D'Antonio,Yang Xie, Qian Yang,Keyi Dong, Pik Ki Lau,Daofeng Li, Chad Seng, Weronika Bartosik,Justin Buchanan, Lin,Ryan Lancione, Kangli Wang, Seoyeon Lee, Zane Gibbs,Joseph Ecker,Kelly Frazer,Ting Wang,Sebastian Preissl,Allen Wang,Radha Ayyagari,Bing Ren
bioRxiv the preprint server for biology (2025)
Tatsuya Nobori, Alexander Monell,Travis A. Lee, Yuka Sakata, Shoma Shirahama,Jingtian Zhou,Joseph R. Nery,Akira Mine,Joseph R. Ecker
NATURE (2025)
Wenliang Wang,Manoj Hariharan,Wubin Ding,Anna Bartlett,Cesar Barragan,Rosa Castanon, Vince Rothenberg,Haili Song,Joseph Nery,Andrew Aldridge,Jordan Altshul,Mia Kenworthy,Hanqing Liu,Wei Tian,Jingtian Zhou,Qiurui Zeng,Huaming Chen,Bei Wei,Irem B Gündüz, Todd Norell,Timothy J Broderick,Micah T McClain,Lisa L Satterwhite,Thomas W Burke,Elizabeth A Petzold,Xiling Shen,Christopher W Woods,Vance G Fowler,Felicia Ruffin,Parinya Panuwet,Dana B Barr, Jennifer L Beare,Anthony K Smith,Rachel R Spurbeck,Sindhu Vangeti,Irene Ramos,German Nudelman,Stuart C Sealfon,Flora Castellino, Anna Maria Walley, Thomas Evans,Fabian Müller,William J Greenleaf,Joseph R Ecker
bioRxiv the preprint server for biology (2025)
Cell genomicsno. 3 (2025): 100774-100774
Tom Denyer, Pin-Jou Wu,Kelly Colt,Bradley W. Abramson, Zhili Pang, Pavel Solansky,Allen Mamerto,Tatsuya Nobori,Joseph R. Ecker,Eric Lam,Todd P. Michael,Marja C. P. Timmermans
GENOME RESEARCHno. 7 (2024): 1106-1120
Matthew G. Heffel,Jingtian Zhou,Yi Zhang,Dong-Sung Lee,Kangcheng Hou, Oier Pastor-Alonso, Kevin D. Abuhanna, Joseph Galasso,Colin Kern, Chu-Yi Tai, Carlos Garcia-Padilla, Mahsa Nafisi, Yi Zhou,Anthony D. Schmitt,Terence Li,Maximilian Haeussler,Brittney Wick,Martin Jinye Zhang,Fangming Xie,Ryan S. Ziffra,Eran A. Mukamel,Eleazar Eskin,Tomasz J. Nowakowski,Jesse R. Dixon,Bogdan Pasaniuc,Joseph R. Ecker,Quan Zhu,Bogdan Bintu,Mercedes F. Paredes,Chongyuan Luo
NATURE (2024)
bioRxiv the preprint server for biology (2024)
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Author Statistics
#Papers: 495
#Citation: 121253
H-Index: 161
G-Index: 348
Sociability: 8
Diversity: 3
Activity: 154
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